LIBRARY CONSTRUCTION & APPLICATIONS
• RNA-Seq, small RNA-Seq, single-cell 3’RNA-Seq (transcriptomics)
• Bisulphite-Seq, RRBS, ChIP-Seq (epigenetics)
• ChIP-Seq, FAIRE-Seq, Hi-C (chromatin structure)
Quality control of samples, library construction
SEQUENCING
• Whole genome (re)sequencing
• Sequencing of targeted genomic regions, of cDNAs
Sequencing by synthesis (Illumina), nanopore sequencing, Sanger sequencing
GENOTYPING
• Microsatellite genotyping
• SNP genotyping
DNA extraction, RAD-Seq, GBS, MicroarraysGénotypage microsatellites
TRANSCRIPTOMIC ANALYSES
• Microarrays
• High throughput quantitative PCR
• Digital droplet PCR
DATA ANALYSIS
• Identification of variants (SNVs, mutations, CNVs, indels)
• Identification of differentially methylated cytosine residues
• Enriched regions (ChIP-Seq)
FACILITIES